You can definitely see a lot of layer1 flaps on some of those example ports. Are these all running through the same patch paneling? Any possible interference? Any easy test would be to hook up a laptop/pc on a port seeing flaps (ex 3/1/36) with a short, direct cat5 cable and see if the port still flaps. That would tell you if the issue is in your cable plant. It definitely looks like a physical issue to me.
Ben Beck, RCNA, RCNI, Principal Technical Support Engineer
support.ruckuswireless.com/contact-us